TY - JOUR
T1 - Polymorphism of fifteen short tandem repeat loci in Tibetan of Changdu area
AU - Kang, Long Li
AU - Li, Yue Ya
AU - Zhang, Xiao Feng
AU - Zhao, Feng Cang
AU - Zhao, Jian Min
AU - Ma, Li Feng
AU - He, Xue
AU - Li, Sheng Bin
PY - 2009/8
Y1 - 2009/8
N2 - Objective: To investigate the genetic polymorphism of 15 autosomal short tandem repeat (STR) loci, i. e. D5S818, FGA, D8S1179, D21S11, D7S820, CSF1PO, D3S1358, TH01, D13S317, D16S539, D2S1338, D19S433, vWA, TPOX and D18S51, in Tibetan population of Changdu area, and to analyze the genetic relationship between this population and other Asian populations. Methods: The 15 loci were amplified simultaneously using a multiplex PCR typing system. Amplified STR fragments were analyzed with an ABI PRISM 3100 Avant DNA Analyzer. Arlequin software version 3.1 was used to obtain allele frequencies and polymorphism parameters. Results: There were 135 STR alleles in the 15 STRs of Changdu Tibetan, with allele frequencies ranging from 0.0065 to 0.5455. The average heterozygosity was 0.7340, the discrimination power was higher than 0.8 except for TPOX and TH01. The accumulative discrimination power was more than 0.9999998, and the accumulative non-parental exclusion probability was 0.99999997. Conclusion: The 15 STR loci of Changdu Tibetan possess characteristics of high genetic diversity. They can be employed in minority genetics investigation, and individual and paternity test in forensic medicine.
AB - Objective: To investigate the genetic polymorphism of 15 autosomal short tandem repeat (STR) loci, i. e. D5S818, FGA, D8S1179, D21S11, D7S820, CSF1PO, D3S1358, TH01, D13S317, D16S539, D2S1338, D19S433, vWA, TPOX and D18S51, in Tibetan population of Changdu area, and to analyze the genetic relationship between this population and other Asian populations. Methods: The 15 loci were amplified simultaneously using a multiplex PCR typing system. Amplified STR fragments were analyzed with an ABI PRISM 3100 Avant DNA Analyzer. Arlequin software version 3.1 was used to obtain allele frequencies and polymorphism parameters. Results: There were 135 STR alleles in the 15 STRs of Changdu Tibetan, with allele frequencies ranging from 0.0065 to 0.5455. The average heterozygosity was 0.7340, the discrimination power was higher than 0.8 except for TPOX and TH01. The accumulative discrimination power was more than 0.9999998, and the accumulative non-parental exclusion probability was 0.99999997. Conclusion: The 15 STR loci of Changdu Tibetan possess characteristics of high genetic diversity. They can be employed in minority genetics investigation, and individual and paternity test in forensic medicine.
KW - Polymorphism
KW - Population genetics
KW - Short tandem repeats
KW - Tibetan
UR - https://www.scopus.com/pages/publications/69249095845
U2 - 10.3760/cma.j.issn.1003-9406.2009.04.024
DO - 10.3760/cma.j.issn.1003-9406.2009.04.024
M3 - 文章
C2 - 20017319
AN - SCOPUS:69249095845
SN - 1003-9406
VL - 26
SP - 469
EP - 473
JO - Chinese Journal of Medical Genetics
JF - Chinese Journal of Medical Genetics
IS - 4
ER -