TY - JOUR
T1 - Meningioma segmentation with GV-UNet
T2 - a hybrid model using a ghost module and vision transformer
AU - Bai, Hua
AU - Zhang, Zhuo
AU - Yang, Yong
AU - Niu, Chen
AU - Gao, Qiang
AU - Ma, Quanfeng
AU - Song, Jian
N1 - Publisher Copyright:
© The Author(s), under exclusive licence to Springer-Verlag London Ltd., part of Springer Nature 2023.
PY - 2024/4
Y1 - 2024/4
N2 - Meningiomas are the most common intracranial tumors in adults. The size and shape of a tumor mostly rely on manual measurement by a neurosurgeon. In recent years, deep learning has rapidly developed and has great potential for medical image segmentation. However, most segmentation models still cannot balance the number of parameters and accuracy. In this study, we proposed a novel segmentation network (named GV-UNet) based on a CNN and a transformer for T1-enhanced images of meningiomas to improve the accuracy and efficiency of tumor segmentation. GV-UNet uses an encoder–decoder as the main structure. In the downsampling process, features are extracted through a standard convolutional layer, and a ConvMixer Layer is used to optimize feature extraction with different sizes of meningiomas. Then, a lightweight transformer block is built to model long-range dependencies. In the final layer of the encoder, we propose an innovative Ghost-CA block, which extracts deep features via feature mapping rather than by elevating dimensionality to reduce the number of parameters. In the upsampling process, we add a SimAM that can incorporate a three-dimensional attention mechanism without increasing network parameters, effectively capturing the relationships between features and the spatial structure of the target. GV-UNet was trained and validated using numerous pathologically confirmed T1-enhanced images of meningiomas from Tianjin Huanhu Hospital. We also utilized meningioma images from the Kaggle dataset to test the robustness of the model.
AB - Meningiomas are the most common intracranial tumors in adults. The size and shape of a tumor mostly rely on manual measurement by a neurosurgeon. In recent years, deep learning has rapidly developed and has great potential for medical image segmentation. However, most segmentation models still cannot balance the number of parameters and accuracy. In this study, we proposed a novel segmentation network (named GV-UNet) based on a CNN and a transformer for T1-enhanced images of meningiomas to improve the accuracy and efficiency of tumor segmentation. GV-UNet uses an encoder–decoder as the main structure. In the downsampling process, features are extracted through a standard convolutional layer, and a ConvMixer Layer is used to optimize feature extraction with different sizes of meningiomas. Then, a lightweight transformer block is built to model long-range dependencies. In the final layer of the encoder, we propose an innovative Ghost-CA block, which extracts deep features via feature mapping rather than by elevating dimensionality to reduce the number of parameters. In the upsampling process, we add a SimAM that can incorporate a three-dimensional attention mechanism without increasing network parameters, effectively capturing the relationships between features and the spatial structure of the target. GV-UNet was trained and validated using numerous pathologically confirmed T1-enhanced images of meningiomas from Tianjin Huanhu Hospital. We also utilized meningioma images from the Kaggle dataset to test the robustness of the model.
KW - Attention mechanism
KW - Medical image segmentation
KW - Meningioma
KW - Transformer
UR - https://www.scopus.com/pages/publications/85180189564
U2 - 10.1007/s11760-023-02914-3
DO - 10.1007/s11760-023-02914-3
M3 - 文章
AN - SCOPUS:85180189564
SN - 1863-1703
VL - 18
SP - 2377
EP - 2390
JO - Signal, Image and Video Processing
JF - Signal, Image and Video Processing
IS - 3
ER -