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Zinc finger and interferon-stimulated genes play a vital role in TB-IRIS following HAART in AIDS

  • Jinmin Ma
  • , Fang Zhao
  • , Wei Su
  • , Qiongfang Li
  • , Jiandong Li
  • , Jingkai Ji
  • , Yong Deng
  • , Yang Zhou
  • , Xinfa Wang
  • , Huanming Yang
  • , Nitin K. Saksena
  • , Karsten Kristiansen
  • , Hui Wang
  • , Yingxia Liu
  • BGI-Shenzhen
  • University of Copenhagen
  • Shenzhen Third People's Hospital
  • Zhejiang University
  • IGO
  • University of Oxford

Research output: Contribution to journalArticlepeer-review

10 Scopus citations

Abstract

Aim: Co-infection in HIV-1 patients with Mycobacterium tuberculosis poses considerable risk of developing the immune reconstitution inflammatory syndrome (IRIS), especially upon the initiation of antiretroviral therapy (ART). Methodology & results: For transcriptomic analysis, peripheral blood mononuclear cells' whole gene expression was used from three patient groups: HIV + (H), HIV-TB + (HT), HIV-TB + with IRIS (HTI). Pathway enrichment and functional analysis was performed before and after highly active ART. Genes in the interferon-stimulating and ZNF families maintained tight functional interaction and tilted the balance in favor of TB-IRIS. Discussion & conclusion: The functional impairment of interaction between ZNF genes and interferon-stimulated genes, along with higher expression of S100A8/S100A9 genes possibly forms the genomic basis of TB-IRIS in a subset of HIV patients while on highly active ART.

Original languageEnglish
Pages (from-to)251-269
Number of pages19
JournalPersonalized Medicine
Volume15
Issue number4
DOIs
StatePublished - 2018
Externally publishedYes

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Keywords

  • DEG
  • HAART
  • HIV
  • TB-IRIS
  • ZNF

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