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Identification and validation of a novel apoptosis-related prognostic risk score model for lung adenocarcinoma

  • Yan Wang
  • , Jiaojiao Zhang
  • , Yong Wan
  • , Baibing Mi
  • , Manxiang Li
  • , Xinming Xie
  • The First Affiliated Hospital of Xi’an Jiaotong University
  • Xi'an Jiaotong University

Research output: Contribution to journalArticlepeer-review

1 Scopus citations

Abstract

The prognostic roles of apoptosis-related genes (ARGs) in lung adenocarcinoma (LUAD) have not been fully elucidated. In this study, differentially expressed genes (DEGs) associated with apoptosis and the hub genes were further identified. The prognostic values of the ARGs were evaluated using the LASSO Cox regression method. Prognostic values were determined using Kaplan-Meier (K-M) curves and receiver operating characteristic (ROC) curves in the TCGA and GEO datasets. The correlations, mutation data, and protein expression of the 10 ARGs predictive models were also analyzed. We identified 130 differentially expressed ARGs. DEGs were used to split LUAD cases into two subtypes whose overall survival (OS) were significantly different (P = 0.025). We developed a novel 10-gene signature using LASSO Cox regression. In both TCGA and GEO datasets, the results of the K-M curve and log-rank test showed significant difference in the survival rate of patients in the high-risk group and low-risk group (P < 0.0001). According to the GO and KEGG analyses, ARGs were enriched in cancer-related terms. In both cohorts, the immune status of the high-risk group was significantly lower than that of the low-risk group. Based on the differential expression of the ARGs, we established a new risk model to predict the prognosis of patients with LUAD.

Original languageEnglish
Pages (from-to)3381-3393
Number of pages13
JournalJournal of Cancer
Volume15
Issue number11
DOIs
StatePublished - 2024
Externally publishedYes

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Keywords

  • Apoptosis-related genes
  • Dataset
  • Immunohistochemical
  • Lung adenocarcinoma
  • Prognostic model

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