Fabrication and application of single nucleotide polymorphisms library on magnetic nanoparticles using adaptor PCR

  • Hongna Liu
  • , Song Li
  • , Meiju Ji
  • , Libo Nie
  • , Jianrong Chen
  • , Yuqing Miao
  • , Nongyue He

Research output: Contribution to journalArticlepeer-review

64 Scopus citations

Abstract

We have developed a novel approach to fabricate single nucleotide polymorphisms (SNPs) library on magnetic nanoparticles (MNPs) based on adaptor PCR. Each SNP locus in the library was interrogated by hybridization with a pair of allele specific dual-color fluorescence (Cy3, Cy5) probes to determine SNR Two SNPs loci (M235T and A-6G) associated with essential hypertension in the angiotensinogen (AGT) gene were detected by this method and their fluorescent signals were quantified. The fluorescent ratios (match probe: mismatch probe signal) of homozygous genotypes were over 3.0, whereas heterozygous genotypes had ratios near to 1.0. Without any complex multiplex PCR procedure, it is a simple, efficient and reliable method for the multiplex SNPs detection using limited amount of DNA samples from individuals.

Original languageEnglish
Pages (from-to)405-409
Number of pages5
JournalJournal of Nanoscience and Nanotechnology
Volume8
Issue number1
DOIs
StatePublished - Jan 2008
Externally publishedYes

Keywords

  • Adaptor PCR
  • Magnetic nanoparticles
  • Microarray
  • Single nucleotide polymorphisms

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