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Detection of circulating tumor DNA in patients with advanced non-small cell lung cancer

  • Yu Yao
  • , Jinghao Liu
  • , Lei Li
  • , Yuan Yuan
  • , Kejun Nan
  • , Xin Wu
  • , Zhenyu Zhang
  • , Yi Wu
  • , Xin Li
  • , Jiaqi Zhu
  • , Xuehong Meng
  • , Longgang Wei
  • , Jun Chen
  • , Zhi Jiang
  • The First Affiliated Hospital of Xi’an Jiaotong University
  • Tianjin Medical University
  • Novogene Co., Ltd.

Research output: Contribution to journalArticlepeer-review

40 Scopus citations

Abstract

Circulating tumor DNA (ctDNA) isolated from plasma has great potential in identification of gene mutation in non-small cell lung cancers (NSCLC), which is a non-invasive technique and can avoid the inherent shortcomings of tissue biopsy. However the ability of NGS to detect gene mutation in plasma ctDNA has not been broadly explored. To assess the diagnostic ability of ctDNA for the total mutation profile, including single nucleotide variations (SNVs), insertions and deletions (indels) and gene rearrangements, we performed a targeted DNA sequencing approach to screen NSCLC related driver gene mutations in both tissue biopsies and matched blood plasma samples from 39 advanced NSCLC patients from China. The sensitivity of EGFR, KRAS, PIK3CA mutations and gene rearrangements detected in plasma ctDNA was 70.6%, 75%, 50% and 60%, respectively and the overall concordance of gene mutations between tissue DNA and plasma ctDNA was 78.21%. Our data provide evidence that ctDNA in plasma is likely to become an alternative source for cancerrelated mutations profiling in advanced NSCLC patients and targeted sequencing of ctDNA offers a promising perspective on precise diagnostics and may serve as a feasible option for clinical monitoring of NSCLC patients.

Original languageEnglish
Pages (from-to)2130-2140
Number of pages11
JournalOncotarget
Volume8
Issue number2
DOIs
StatePublished - 2017
Externally publishedYes

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Keywords

  • Circulating tumor DNA
  • EGFR
  • Gene fusion
  • NSCLC
  • Targeted sequencing

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