TY - GEN
T1 - A Statistical Explainable Learning Model Optimizing Co-localization of Multidimensional Positivity Thresholds in Immunotherapy Decision-Supporting
AU - Wang, Yixuan
AU - Liu, Jingjing
AU - Zhao, Jian
AU - Wang, Jiayin
AU - Wang, Quan
AU - Song, Xiaofeng
N1 - Publisher Copyright:
© 2023 IEEE.
PY - 2023
Y1 - 2023
N2 - Tumor Mutation Burden (TMB) serves as a recognized stratified biomarker for immunotherapy. However, its one-dimensional representation of non-synonymous genetic alterations has been contentious. Specifically, the uniform quantification of mutations by TMB, coupled with measurement inaccuracies, complicates the accurate determination of a positive threshold for classifying patients. Parallel to this, assessing immunotherapy benefits requires the joint analysis of multiscale endpoints, namely discrete tumor response and sequential time-to-event, presenting a pressing challenge for clinical computation. Recognizing the intertwined nature of these challenges, we address the inter-sample bias inherent in multidimensional mutation biomarkers within the framework of multiscale endpoint fusion analysis, aiming for a more robust and comprehensive patient stratification. By combining the concept of corrected-score with a soft-threshold strategy, and utilizing the attention mechanism alongside the multiple instance learning, we propose a statistically explainable learning model optimizing co-localization of multidimensional positivity thresholds for immunotherapy categorical decision-supporting.
AB - Tumor Mutation Burden (TMB) serves as a recognized stratified biomarker for immunotherapy. However, its one-dimensional representation of non-synonymous genetic alterations has been contentious. Specifically, the uniform quantification of mutations by TMB, coupled with measurement inaccuracies, complicates the accurate determination of a positive threshold for classifying patients. Parallel to this, assessing immunotherapy benefits requires the joint analysis of multiscale endpoints, namely discrete tumor response and sequential time-to-event, presenting a pressing challenge for clinical computation. Recognizing the intertwined nature of these challenges, we address the inter-sample bias inherent in multidimensional mutation biomarkers within the framework of multiscale endpoint fusion analysis, aiming for a more robust and comprehensive patient stratification. By combining the concept of corrected-score with a soft-threshold strategy, and utilizing the attention mechanism alongside the multiple instance learning, we propose a statistically explainable learning model optimizing co-localization of multidimensional positivity thresholds for immunotherapy categorical decision-supporting.
KW - Tumor mutation burden
KW - attention mechanism
KW - clinical decision-supporting
KW - error control
KW - multiple instance learning
UR - https://www.scopus.com/pages/publications/85184935365
U2 - 10.1109/BIBM58861.2023.10385439
DO - 10.1109/BIBM58861.2023.10385439
M3 - 会议稿件
AN - SCOPUS:85184935365
T3 - Proceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023
SP - 4439
EP - 4443
BT - Proceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023
A2 - Jiang, Xingpeng
A2 - Wang, Haiying
A2 - Alhajj, Reda
A2 - Hu, Xiaohua
A2 - Engel, Felix
A2 - Mahmud, Mufti
A2 - Pisanti, Nadia
A2 - Cui, Xuefeng
A2 - Song, Hong
PB - Institute of Electrical and Electronics Engineers Inc.
T2 - 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023
Y2 - 5 December 2023 through 8 December 2023
ER -