Skip to main navigation Skip to search Skip to main content

A Chromosome-Level Genome Assembly of the Anglerfish Lophius litulon

  • Meiqi Lv
  • , Yaolei Zhang
  • , Kaiqiang Liu
  • , Chang Li
  • , Jiahao Wang
  • , Guangyi Fan
  • , Xin Liu
  • , Huanming Yang
  • , Changlin Liu
  • , Shahid Mahboob
  • , Junnian Liu
  • , Changwei Shao
  • University of Chinese Academy of Sciences
  • BGI-Shenzhen
  • Technical University of Denmark
  • Chinese Academy of Fishery Sciences
  • Pilot National Laboratory for Marine Science and Technology
  • King Saud University

Research output: Contribution to journalArticlepeer-review

5 Scopus citations

Abstract

Anglerfishes are a highly diverse group of species with unique characteristics. Here, we report the first chromosome-level genome of a species in the order Lophiiformes, the yellow goosefish (Lophius litulon), obtained by whole genome shotgun sequencing and high-throughput chromatin conformation capture. Approximately 97.20% of the assembly spanning 709.23 Mb could be anchored to 23 chromosomes with a contig N50 of 164.91 kb. The BUSCO value was 95.4%, suggesting that the quality of the assembly was high. A comparative gene family analysis identified expanded and contracted gene families, and these may be associated with adaptation to the benthic environment and the lack of scales in the species. A majority of positively selected genes were related to metabolic processes, suggesting that digestive and metabolic system evolution expanded the diversity of yellow goosefish prey. Our study provides a valuable genetic resource for understanding the mechanisms underlying the unique features of the yellow goosefish and for investigating anglerfish evolution.

Original languageEnglish
Article number581161
JournalFrontiers in Genetics
Volume11
DOIs
StatePublished - 27 Nov 2020
Externally publishedYes

Keywords

  • Lophiiformes
  • Lophius litulon
  • anglerfish
  • chromosomal evolution
  • metabolism

Fingerprint

Dive into the research topics of 'A Chromosome-Level Genome Assembly of the Anglerfish Lophius litulon'. Together they form a unique fingerprint.

Cite this